Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO42_04850 | Not Available | Negative | 3163256 - 3163864 | 23304.8 |
| uncharacterized protein | ALO42_02129 | Not Available | Negative | 3163880 - 3165247 | 49542.7 |
| paar motif-containing protein | ALO42_02130 | Not Available | Positive | 3165505 - 3166674 | 41388.4 |
| nudix hydrolase | ALO42_04851 | Not Available | Negative | 3167178 - 3167336 | 6171.12 |
| hypothetical protein | ALO42_102086 | Not Available | Positive | 3167511 - 3167627 | 4466.42 |
| exodeoxyribonuclease v, alpha subunit | ALO42_04852 | Not Available | Negative | 3167690 - 3169789 | 76698.2 |
| exodeoxyribonuclease v, beta subunut | ALO42_04854 | Not Available | Negative | 3169780 - 3173553 | 140855.0 |
| exodeoxyribonuclease v subunit gamma | ALO42_04855 | Not Available | Negative | 3173469 - 3175298 | 67174.9 |
| uncharacterized protein | ALO42_01865 | Not Available | Positive | 3177132 - 3177380 | 9056.0 |
| amino acid adenylation | ALO42_04723 | Not Available | Negative | 3178894 - 3179093 | 7029.62 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









