Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglutaminase domain protein | ALO42_04387 | Not Available | Negative | 3151258 - 3153303 | 76687.1 |
| uncharacterized protein | ALO42_00491 | Not Available | Negative | 3153264 - 3154220 | 35505.4 |
| putative moxr protein | ALO42_00492 | Not Available | Negative | 3154217 - 3154501 | 10276.5 |
| yd repeat-containing protein | ALO42_04314 | Not Available | Negative | 3154510 - 3154660 | 5996.95 |
| uncharacterized protein | ALO42_00201 | Not Available | Negative | 3154812 - 3155405 | 22983.1 |
| hypothetical protein | ALO42_102366 | Not Available | Positive | 3156244 - 3156762 | 18120.8 |
| gamma-glutamyltranspeptidase | ALO42_02125 | Not Available | Negative | 3157496 - 3159223 | 61077.2 |
| 3-hydroxyisobutyrate dehydrogenase | ALO42_02126 | Not Available | Negative | 3159429 - 3160316 | 30114.4 |
| methylmalonate-semialdehyde dehydrogenase | ALO42_04849 | Not Available | Negative | 3160350 - 3161969 | 57398.8 |
| transcriptional regulator, lysr family | ALO42_02128 | Not Available | Positive | 3162035 - 3162982 | 35682.1 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









