Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription elongation factor greb | ALO42_00480 | Not Available | Negative | 3143136 - 3143609 | 18635.1 |
| uncharacterized protein | ALO42_00481 | Not Available | Negative | 3143657 - 3143986 | 12308.9 |
| uncharacterized protein | ALO42_00482 | Not Available | Negative | 3144091 - 3144450 | 13296.2 |
| doxd-like family protein | ALO42_00483 | Not Available | Negative | 3144644 - 3145078 | 15004.9 |
| slt protein | ALO42_00484 | Not Available | Negative | 3145191 - 3146612 | 52800.8 |
| deoxyribonuclease tatd | ALO42_00485 | Not Available | Positive | 3146793 - 3147632 | 31425.3 |
| methyl-accepting chemotaxis protein | ALO42_00486 | Not Available | Positive | 3147717 - 3149192 | 52723.0 |
| putative phage terminase, small subunit | ALO42_00487 | Not Available | Positive | 3149279 - 3149542 | 9489.54 |
| putative acyl-coa thioesterase ii | ALO42_00488 | Not Available | Negative | 3149555 - 3150358 | 28952.9 |
| chad domain protein | ALO42_00489 | Not Available | Negative | 3150472 - 3151233 | 28650.9 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









