Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate synthase, large subunit | ALO42_00836 | Not Available | Negative | 236281 - 237621 | 47579.3 |
| glutamate synthase, small subunit | ALO42_04489 | Not Available | Negative | 237637 - 238383 | 26103.0 |
| glutamine amidotransferase-like protein glxb | ALO42_00838 | Not Available | Negative | 238317 - 239237 | 33435.8 |
| glutamine synthetase, type iii | ALO42_04490 | Not Available | Negative | 239388 - 240722 | 49147.5 |
| helix-turn-helix motif protein | ALO42_04491 | Not Available | Positive | 241011 - 241616 | 22463.0 |
| putative membrane protein | ALO42_00840 | Not Available | Negative | 241665 - 242831 | 43663.4 |
| putative carbonic anhydrase | ALO42_00841 | Not Available | Negative | 242883 - 243443 | 19903.7 |
| gtp cyclohydrolase fole2 | ALO42_00842 | Not Available | Negative | 243455 - 244360 | 33006.4 |
| lysr family transcriptional regulator | ALO42_00843 | Not Available | Negative | 244535 - 245443 | 33428.4 |
| peptide abc transporter substrate-binding protein | ALO42_00844 | Not Available | Positive | 245652 - 247172 | 56297.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









