Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5'-nucleotidase | ALO42_00471 | Not Available | Negative | 3133342 - 3134262 | 33417.3 |
| 2-dehydropantoate 2-reductase | ALO42_00472 | Not Available | Negative | 3134266 - 3135237 | 34649.8 |
| phospho-2-dehydro-3-deoxyheptonate aldolase | ALO42_00473 | Not Available | Positive | 3135435 - 3136547 | 40319.2 |
| uncharacterized protein | ALO42_00474 | Not Available | Negative | 3136638 - 3136925 | 10766.8 |
| outer membrane lipoprotein i | ALO42_00475 | Not Available | Positive | 3137357 - 3137638 | 9975.81 |
| putative l,d-transpeptidase | ALO42_00476 | Not Available | Negative | 3137812 - 3138777 | 34459.5 |
| uncharacterized protein | ALO42_00477 | Not Available | Negative | 3138890 - 3139171 | 10709.2 |
| arylesterase | ALO42_04386 | Not Available | Negative | 3139228 - 3139845 | 21713.4 |
| abc transporter | ALO42_04384 | Not Available | Positive | 3139547 - 3140527 | 35005.9 |
| putative abc-type transport system involved in lysophospholipase l1 biosynthesis, permease protein | ALO42_00479 | Not Available | Positive | 3140527 - 3143043 | 89464.2 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









