Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylisocitrate lyase | ALO42_100053 | Not Available | Negative | 3123564 - 3124457 | 32018.3 |
| gntr family transcriptional regulator | ALO42_00462 | Not Available | Negative | 3124454 - 3125173 | 27162.4 |
| uncharacterized protein | ALO42_00463 | Not Available | Positive | 3125471 - 3126007 | 19706.6 |
| uncharacterized protein | ALO42_00464 | Not Available | Positive | 3126012 - 3127547 | 56862.0 |
| uncharacterized protein | ALO42_00465 | Not Available | Positive | 3127544 - 3128524 | 36016.5 |
| para-aminobenzoate synthase subunit i | ALO42_00466 | Not Available | Positive | 3128600 - 3129943 | 48862.1 |
| bifunctional phosphoserine phosphatase/homoserine phosphotransferase | ALO42_00467 | Not Available | Negative | 3129993 - 3130610 | 23638.6 |
| phosphoadenosine phosphosulfate reductase | ALO42_00468 | Not Available | Positive | 3130750 - 3131484 | 28011.2 |
| cys regulon transcriptional activator cysb | ALO42_00469 | Not Available | Negative | 3131646 - 3132620 | 36248.0 |
| universal stress protein family, uspa-like protein | ALO42_00470 | Not Available | Negative | 3132771 - 3133265 | 18114.1 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









