Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytoplasmic membrane protein cmpx | ALO42_00453 | Not Available | Negative | 3110876 - 3111700 | 28933.5 |
| crfx protein | ALO42_00454 | Not Available | Negative | 3111703 - 3111951 | 8790.31 |
| cmax protein | ALO42_00455 | Not Available | Negative | 3112037 - 3113032 | 37804.5 |
| ribonuclease activity regulator protein rraa | ALO42_00456 | Not Available | Negative | 3113044 - 3113532 | 17482.0 |
| esterase/lipase/thioesterase family protein | ALO42_100476 | Not Available | Negative | 3113627 - 3114733 | 40961.6 |
| phosphoenolpyruvate synthase | ALO42_00457 | Not Available | Negative | 3114809 - 3117184 | 86100.1 |
| putative phosphoenolpyruvate synthase regulatory protein | ALO42_00458 | Not Available | Positive | 3117407 - 3118225 | 30989.7 |
| acnd-accessory protein prpf | ALO42_00459 | Not Available | Negative | 3118257 - 3119447 | 41007.0 |
| aconitase | ALO42_00460 | Not Available | Negative | 3119584 - 3122172 | 93907.2 |
| citrate synthase | ALO42_00461 | Not Available | Negative | 3122275 - 3123414 | 42259.7 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









