Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two component transcriptional regulator, luxr family | ALO42_00436 | Not Available | Positive | 3083228 - 3083866 | 23951.4 |
| two component system hybrid sensory histidine kinase/evga-like protein | ALO42_00437 | Not Available | Positive | 3083875 - 3087495 | 134276.0 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | ALO42_00438 | Not Available | Positive | 3088272 - 3089738 | 52937.0 |
| chase/pas/ggdef domain protein | ALO42_04371 | Not Available | Negative | 3089791 - 3092253 | 92136.8 |
| ribosomal rna large subunit methyltransferase k/l | ALO42_04374 | Not Available | Negative | 3092384 - 3094690 | 86498.3 |
| ribosome modulation factor | ALO42_00441 | Not Available | Positive | 3095225 - 3095440 | 8192.81 |
| dihydroorotate dehydrogenase | ALO42_00442 | Not Available | Negative | 3095582 - 3096613 | 36235.0 |
| nitrate abc-type transport system, periplasmic substrate-binding protein | ALO42_00443 | Not Available | Positive | 3097091 - 3098302 | 43969.8 |
| response regulator nast | ALO42_00444 | Not Available | Positive | 3098317 - 3098892 | 21502.4 |
| levansucrase lsca | ALO42_04375 | Not Available | Negative | 3098952 - 3100484 | 56355.8 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









