Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxybenzoate transporter | ALO42_00428 | Not Available | Negative | 3074165 - 3075514 | 47283.0 |
| protocatechuate 3,4-dioxygenase subunit alpha | ALO42_100024 | Not Available | Negative | 3075602 - 3076204 | 22390.2 |
| protocatechuate 3,4-dioxygenase, beta subunit | ALO42_00429 | Not Available | Negative | 3076216 - 3076968 | 27975.4 |
| regulatory protein, lysr:lysr, substrate-binding protein | ALO42_04369 | Not Available | Negative | 3077072 - 3078013 | 34277.9 |
| glutaredoxin-like domain protein | ALO42_00431 | Not Available | Negative | 3078045 - 3078287 | 9057.92 |
| membrane protein | ALO42_00432 | Not Available | Positive | 3079663 - 3079977 | 11364.4 |
| putative membrane protein | ALO42_00433 | Not Available | Positive | 3079982 - 3080374 | 14024.4 |
| uncharacterized protein | ALO42_00434 | Not Available | Positive | 3080371 - 3080727 | 13570.0 |
| deoxyguanosinetriphosphate triphosphohydrolase-like protein | ALO42_00435 | Not Available | Positive | 3080898 - 3082238 | 49946.7 |
| two component system response regulator reciever | ALO42_04370 | Not Available | Positive | 3082518 - 3082880 | 13357.3 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









