Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine phosphoribosyltransferase | ALO42_01107 | Not Available | Positive | 3059596 - 3060165 | 20162.5 |
| 3',5'-bisphosphate nucleotidase | ALO42_04747 | Not Available | Negative | 3061219 - 3061967 | 27005.9 |
| transglutaminase domain-containing protein | ALO42_04227 | Not Available | Positive | 3062281 - 3065559 | 123114.0 |
| hypothetical protein | ALO42_100096 | Not Available | Positive | 3065631 - 3068144 | 93374.9 |
| transglutaminase-like protein | ALO42_04228 | Not Available | Positive | 3068144 - 3069037 | 33793.3 |
| azurin | ALO42_04229 | Not Available | Positive | 3069190 - 3069636 | 16061.4 |
| uncharacterized protein | ALO42_00424 | Not Available | Negative | 3069945 - 3070916 | 34749.4 |
| oprd family outer membrane porin | ALO42_00425 | Not Available | Positive | 3071069 - 3072325 | 46092.7 |
| 4-carboxymuconolactone decarboxylase | ALO42_00426 | Not Available | Negative | 3072384 - 3072782 | 14962.9 |
| 3-carboxy-cis, cis-muconate cycloisomerase | ALO42_00427 | Not Available | Negative | 3072779 - 3074140 | 49060.2 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









