Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secreted zn-dependent peptidase, insulinase family | ALO42_04569 | Not Available | Negative | 3046661 - 3048073 | 52995.2 |
| sodium-dependent phosphate transporter-family protein | ALO42_100576 | Not Available | Negative | 3048095 - 3049774 | 60598.3 |
| hypothetical protein | ALO42_101912 | Not Available | Negative | 3049867 - 3049989 | 4348.35 |
| putative s-adenosylmethionine-dependent methyltransferase | ALO42_01102 | Not Available | Negative | 3050047 - 3050766 | 26555.5 |
| histidine kinase, hamp region: chemotaxis sensory transducer | ALO42_01103 | Not Available | Negative | 3051021 - 3052997 | 70190.0 |
| lysr family transcriptional regulator | ALO42_01104 | Not Available | Negative | 3053184 - 3054104 | 34583.8 |
| hypothetical protein | ALO42_102260 | Not Available | Negative | 3054132 - 3054272 | 5170.47 |
| multidrug efflux protein nora, mate family | ALO42_04570 | Not Available | Positive | 3054271 - 3055653 | 48648.1 |
| ggdef/eal domain protein | ALO42_01106 | Not Available | Negative | 3055666 - 3057330 | 62026.8 |
| atp-dependent dna helicase rep | ALO42_100040 | Not Available | Positive | 3057511 - 3059544 | 77516.8 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









