Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sco1/senc/prrc family protein | ALO42_01401 | Not Available | Positive | 3034224 - 3034829 | 22018.7 |
| putative copper-binding protein | ALO42_01402 | Not Available | Positive | 3034829 - 3035317 | 17118.6 |
| ferric siderophore uptake system, tonb family protein | ALO42_01403 | Not Available | Positive | 3035668 - 3036501 | 29314.7 |
| ferric siderophore uptake system, mota/tolq/exbb family protein | ALO42_01404 | Not Available | Positive | 3036630 - 3037358 | 25691.0 |
| ferric siderophore transport system protein, exbd/tolr family | ALO42_01405 | Not Available | Positive | 3037360 - 3037761 | 14270.4 |
| tonb-dependent receptor:tonb-dependent receptor | ALO42_01406 | Not Available | Positive | 3038043 - 3040445 | 86265.5 |
| non-ribosomal peptide synthetase | ALO42_05296 | Not Available | Positive | 3040670 - 3043853 | 115620.0 |
| hypothetical protein | ALO42_102229 | Not Available | Positive | 3044426 - 3044891 | 17147.4 |
| putative membrane protein | ALO42_01099 | Not Available | Positive | 3045093 - 3045352 | 8831.59 |
| uncharacterized protein | ALO42_01100 | Not Available | Negative | 3045357 - 3046565 | 44575.1 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









