Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative acyltransferase | ALO42_01385 | Not Available | Negative | 226210 - 227103 | 33770.5 |
| putative atp-dependent zinc protease | ALO42_01386 | Not Available | Positive | 227297 - 227800 | 18563.2 |
| glutathione s-transferase family protein | ALO42_01387 | Not Available | Negative | 227905 - 228534 | 23638.1 |
| uncharacterized protein | ALO42_01388 | Not Available | Negative | 228604 - 228786 | 6474.16 |
| pepsy-associated tm helix | ALO42_01389 | Not Available | Negative | 228783 - 229916 | 41576.9 |
| fecr protein | ALO42_04634 | Not Available | Negative | 230038 - 231021 | 35810.0 |
| rna polymerase sigma factor, ecf family | ALO42_01391 | Not Available | Negative | 231018 - 231536 | 19496.8 |
| oxygen-dependent choline dehydrogenase | ALO42_01392 | Not Available | Negative | 231820 - 233526 | 62721.3 |
| nad/nadp-dependent betaine aldehyde dehydrogenase | ALO42_04636 | Not Available | Negative | 233667 - 235154 | 53754.0 |
| hth-type transcriptional regulator beti | ALO42_01394 | Not Available | Negative | 235241 - 235834 | 21982.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









