Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, lysr family | ALO42_02934 | Not Available | Negative | 3006288 - 3007217 | 35162.6 |
| fade2-like acyl-coa dehydrogenase | ALO42_02935 | Not Available | Positive | 3007403 - 3008632 | 45131.5 |
| phosphate-binding domain / peptidoglycan-binding domain fusion protein | ALO42_02936 | Not Available | Negative | 3008644 - 3009999 | 48499.1 |
| exodeoxyribonuclease iii | ALO42_02937 | Not Available | Negative | 3010134 - 3010946 | 31040.7 |
| gnat family acetyltransferase | ALO42_02938 | Not Available | Positive | 3011139 - 3011810 | 25288.4 |
| uncharacterized protein | ALO42_02939 | Not Available | Positive | 3011825 - 3013594 | 64926.8 |
| uncharacterized protein | ALO42_02940 | Not Available | Positive | 3013591 - 3017280 | 131349.0 |
| lysr family transcriptional regulator | ALO42_02941 | Not Available | Positive | 3017388 - 3018317 | 34151.6 |
| putative thiol peroxidase | ALO42_02942 | Not Available | Positive | 3018408 - 3018908 | 17295.5 |
| cation/multidrug rnd-type efflux system, membrane fusion protein | ALO42_02943 | Not Available | Positive | 3019061 - 3020365 | 46788.2 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









