Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative permease, taue/safe family | ALO42_02916 | Not Available | Negative | 2980483 - 2981325 | 29487.6 |
| short-chain dehydrogenase/reductase family oxidoreductase | ALO42_02917 | Not Available | Negative | 2982604 - 2983371 | 26749.2 |
| aminoglycoside phosphotransferase | ALO42_05026 | Not Available | Negative | 2983399 - 2984466 | 40715.6 |
| sterol-binding protein | ALO42_02919 | Not Available | Negative | 2984679 - 2984996 | 11277.6 |
| phosphoglycerate mutase family protein | ALO42_02920 | Not Available | Negative | 2985052 - 2985762 | 26076.2 |
| putative inner membrane peptidase | ALO42_02921 | Not Available | Positive | 2985968 - 2986990 | 38000.2 |
| uncharacterized protein | ALO42_02922 | Not Available | Negative | 2987541 - 2988035 | 18897.2 |
| sulfite reductase, beta subunit | ALO42_05027 | Not Available | Negative | 2988019 - 2989725 | 64101.5 |
| hypothetical protein | ALO42_02924 | Not Available | Positive | 2990017 - 2990130 | 4073.1 |
| b12-dependent methionine synthase | ALO42_05028 | Not Available | Negative | 2990249 - 2993992 | 136785.0 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









