Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| unknown protein sequence | ALO42_01492 | Not Available | Negative | 2964590 - 2965885 | 48666.0 |
| uncharacterized protein | ALO42_02909 | Not Available | Negative | 2966355 - 2967689 | 49588.2 |
| two-component response regulator | ALO42_100208 | Not Available | Negative | 2967682 - 2968095 | 15118.3 |
| two-component hybrid sensor histidine kinase/response regulator | ALO42_02910 | Not Available | Positive | 2968386 - 2971904 | 131423.0 |
| chemotaxis protein methyltransferase cher | ALO42_02911 | Not Available | Positive | 2971933 - 2972775 | 31954.2 |
| protein-glutamate methylesterase | ALO42_02912 | Not Available | Positive | 2972772 - 2973386 | 21591.9 |
| sensor histidine kinase/response regulator | ALO42_100164 | Not Available | Positive | 2973380 - 2974561 | 44320.8 |
| two-component hybrid sensor histidine kinase/response regulator | ALO42_02913 | Not Available | Negative | 2975096 - 2977126 | 74660.3 |
| uncharacterized protein | ALO42_02914 | Not Available | Negative | 2977123 - 2978607 | 54363.4 |
| enoyl-coa hydratase | ALO42_05025 | Not Available | Positive | 2978714 - 2979640 | 33771.7 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









