Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO42_200075 | Not Available | Negative | 2928989 - 2929174 | 6690.34 |
| hypothetical protein | ALO42_200084 | Not Available | Positive | 2929243 - 2929449 | 7964.55 |
| hypothetical protein | ALO42_200073 | Not Available | Positive | 2929449 - 2929610 | 5841.91 |
| hypothetical protein | ALO42_200083 | Not Available | Negative | 2929559 - 2930809 | 45878.1 |
| phospholipase d/transphosphatidylase | ALO42_01304 | Not Available | Positive | 2930815 - 2931760 | 35698.5 |
| major facilitator transporter | ALO42_01305 | Not Available | Negative | 2931757 - 2932911 | 40394.9 |
| aldehyde dehydrogenase | ALO42_04617 | Not Available | Negative | 2933038 - 2934594 | 55537.3 |
| uncharacterized protein | ALO42_01307 | Not Available | Positive | 2934771 - 2935139 | 13629.8 |
| 50s ribosomal protein l33 | ALO42_01308 | Not Available | Negative | 2935221 - 2935376 | 5974.36 |
| 50s ribosomal protein l28 | ALO42_100080 | Not Available | Negative | 2935388 - 2935621 | 8936.03 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









