Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transport system permease protein | ALO42_01879 | Not Available | Positive | 2873356 - 2874324 | 33568.3 |
| iron dicitrate transport system, atp-binding protein fece | ALO42_01880 | Not Available | Positive | 2874329 - 2875120 | 28437.5 |
| basic membrane lipoprotein family protein | ALO42_01881 | Not Available | Positive | 2875308 - 2876402 | 39500.2 |
| isopenicillin n synthase-like dioxygenase | ALO42_01882 | Not Available | Positive | 2876480 - 2877445 | 36082.6 |
| adenine deaminase | ALO42_01883 | Not Available | Positive | 2877524 - 2878477 | 36159.0 |
| arsr family transcriptional regulator | ALO42_01884 | Not Available | Negative | 2878607 - 2879299 | 24878.2 |
| lysr family transcriptional regulator | ALO42_01885 | Not Available | Negative | 2879736 - 2880662 | 34188.4 |
| zinc-containing alcohol dehydrogenase superfamily protein | ALO42_01886 | Not Available | Positive | 2880777 - 2881790 | 36807.4 |
| multidrug resistance transporter, bcr/cfla family | ALO42_100138 | Not Available | Negative | 2881866 - 2883143 | 44461.6 |
| heavy metal transport/detoxification protein | ALO42_01887 | Not Available | Negative | 2883200 - 2883397 | 7043.38 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









