Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-ketoacyl- reductase | ALO42_00962 | Not Available | Negative | 2849403 - 2850152 | 25614.0 |
| 3-ketoacyl- reductase | ALO42_00963 | Not Available | Negative | 2850270 - 2851031 | 26454.8 |
| putative sugar transporter, mfs superfamily | ALO42_00964 | Not Available | Negative | 2851042 - 2852382 | 47618.4 |
| putative polysaccharide deacetylase | ALO42_00965 | Not Available | Negative | 2852410 - 2853291 | 33851.3 |
| uncharacterized protein | ALO42_04523 | Not Available | Negative | 2853368 - 2854810 | 50515.8 |
| gntr family transcriptional regulator | ALO42_00967 | Not Available | Positive | 2855002 - 2856081 | 40357.6 |
| methylmalonate-semialdehyde dehydrogenase | ALO42_01866 | Not Available | Negative | 2856511 - 2858004 | 53606.4 |
| omega-amino acid--pyruvate aminotransferase | ALO42_01867 | Not Available | Negative | 2858095 - 2859441 | 48741.5 |
| lysr family transcriptional regulator | ALO42_01868 | Not Available | Positive | 2859553 - 2860473 | 33893.7 |
| xanthine/uracil permease family protein | ALO42_01869 | Not Available | Positive | 2860660 - 2862057 | 48738.7 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









