Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation/multidrug rnd-type efflux system, acrb/acrd/acrf family plasma membrane protein | ALO42_01714 | Not Available | Negative | 2812884 - 2813220 | 12464.7 |
| non-ribosomal peptide synthetase | ALO42_04919 | Not Available | Negative | 2813221 - 2815107 | 69526.0 |
| hypothetical protein | ALO42_102447 | Not Available | Positive | 2816317 - 2817194 | 32294.8 |
| siderophore-interacting protein | ALO42_00958 | Not Available | Positive | 2842222 - 2842851 | 23208.4 |
| integral membrane protein | ALO42_100590 | Not Available | Negative | 2842867 - 2843556 | 25638.9 |
| hypothetical protein | ALO42_100822 | Not Available | Negative | 2843580 - 2843948 | 14084.0 |
| glucose dehydrogenase | ALO42_00959 | Not Available | Positive | 2844249 - 2846672 | 86882.0 |
| uncharacterized protein | ALO42_04522 | Not Available | Negative | 2846884 - 2848392 | 55591.0 |
| putative g3e family gtpase | ALO42_00961 | Not Available | Negative | 2848077 - 2849084 | 36755.5 |
| hypothetical protein | ALO42_100094 | Not Available | Negative | 2849081 - 2849590 | 18836.8 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









