Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| co-chaperone protein hscb -like protein | ALO42_00732 | Not Available | Positive | 2774207 - 2774728 | 20206.8 |
| multidrug rnd efflux transporter, permease mdtc | ALO42_04772 | Not Available | Negative | 2775585 - 2775976 | 13599.9 |
| gcn5-related n-acetyltransferase | ALO42_00172 | Not Available | Positive | 2776169 - 2776669 | 18839.7 |
| u32 family peptidase | ALO42_00173 | Not Available | Negative | 2776724 - 2778730 | 74416.7 |
| abc transporter | ALO42_00174 | Not Available | Negative | 2778837 - 2779628 | 28109.2 |
| cobalamin/heme/siderophore abc-type transport system, permease protein | ALO42_00175 | Not Available | Negative | 2779625 - 2780647 | 34975.0 |
| cobalamin/fe3+-siderophores abc-type transport system, periplasmic substrate-binding protein | ALO42_00176 | Not Available | Negative | 2780644 - 2781657 | 37215.6 |
| histidine phosphatase domain protein | ALO42_00177 | Not Available | Positive | 2782302 - 2782997 | 25189.1 |
| pap2 superfamily protein | ALO42_00178 | Not Available | Positive | 2782994 - 2783866 | 32652.7 |
| two-component dna-binding response regulator | ALO42_00179 | Not Available | Positive | 2783887 - 2784561 | 25264.7 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









