Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase fold | ALO42_100649 | Not Available | Positive | 2723714 - 2724964 | 46039.6 |
| amino acid adenylation | ALO42_05371 | Not Available | Positive | 2725204 - 2733718 | 313441.0 |
| putative ap superfamily protein | ALO42_04745 | Not Available | Negative | 2733719 - 2734166 | 16961.7 |
| acriflavin resistance protein | ALO42_04725 | Not Available | Positive | 2734169 - 2734753 | 21307.5 |
| non-ribosomal peptide synthetase | ALO42_01600 | Not Available | Negative | 2734754 - 2735241 | 17314.0 |
| hypothetical protein | ALO42_200025 | Not Available | Negative | 2735333 - 2735566 | 8131.83 |
| hypothetical protein | ALO42_200079 | Not Available | Negative | 2735718 - 2736209 | 18242.2 |
| hypothetical protein | ALO42_200065 | Not Available | Negative | 2736297 - 2736494 | 7418.4 |
| hypothetical protein | ALO42_200087 | Not Available | Positive | 2736767 - 2737147 | 13811.4 |
| hypothetical protein | ALO42_200052 | Not Available | Positive | 2737188 - 2738000 | 29122.5 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









