Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative trna-m1a22 methylase | ALO42_100585 | Not Available | Positive | 2652582 - 2653277 | 25794.1 |
| uncharacterized protein | ALO42_01118 | Not Available | Positive | 2653477 - 2654016 | 19755.6 |
| esterase/lipase | ALO42_100409 | Not Available | Negative | 2654026 - 2655075 | 38202.5 |
| d-galactose 1-dehydrogenase | ALO42_01119 | Not Available | Negative | 2655072 - 2655998 | 33531.9 |
| uncharacterized protein | ALO42_01120 | Not Available | Positive | 2656300 - 2656719 | 14709.0 |
| cation efflux family protein | ALO42_01121 | Not Available | Positive | 2656745 - 2657638 | 31715.7 |
| uncharacterized protein | ALO42_01072 | Not Available | Positive | 2658224 - 2658649 | 15984.3 |
| uncharacterized protein | ALO42_01073 | Not Available | Positive | 2658646 - 2658900 | 9266.07 |
| prophage psssm-02, orf11 | ALO42_01074 | Not Available | Positive | 2658970 - 2659566 | 22271.9 |
| unknown protein sequence | ALO42_01075 | Not Available | Negative | 2661276 - 2661644 | 13462.8 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









