Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative fe-s-cluster oxidoreductase | ALO42_02382 | Not Available | Positive | 2615540 - 2615764 | 8482.19 |
| lipid a deacylase | ALO42_02383 | Not Available | Negative | 2616070 - 2616588 | 19054.2 |
| glutamate racemase | ALO42_02384 | Not Available | Negative | 2616706 - 2617521 | 29434.8 |
| molybdopterin biosynthesis protein moeb | ALO42_02385 | Not Available | Negative | 2617514 - 2618293 | 27324.9 |
| release factor glutamine methyltransferase | ALO42_02386 | Not Available | Negative | 2618278 - 2619111 | 30524.4 |
| peptide chain release factor 1 | ALO42_02387 | Not Available | Negative | 2619112 - 2620194 | 40057.1 |
| glutamyl-trna reductase | ALO42_02388 | Not Available | Negative | 2620191 - 2621468 | 46114.4 |
| tpr domain-containing protein | ALO42_02389 | Not Available | Positive | 2621713 - 2623422 | 63488.9 |
| outer-membrane lipoprotein lolb | ALO42_02390 | Not Available | Positive | 2623427 - 2624044 | 22944.3 |
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | ALO42_02391 | Not Available | Positive | 2624041 - 2624895 | 30807.3 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









