Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| extracellular solute-binding protein | ALO42_04912 | Not Available | Positive | 2597660 - 2598514 | 31280.2 |
| amino acid abc-type transport system, permease protein | ALO42_02363 | Not Available | Positive | 2598511 - 2599344 | 30605.2 |
| uncharacterized protein | ALO42_02364 | Not Available | Negative | 2599655 - 2599942 | 11191.2 |
| uncharacterized protein | ALO42_02365 | Not Available | Negative | 2600009 - 2600512 | 18275.0 |
| hypoxanthine phosphoribosyltransferase | ALO42_02366 | Not Available | Negative | 2600579 - 2601175 | 22188.8 |
| uracil phosphoribosyltransferase | ALO42_02367 | Not Available | Positive | 2601495 - 2601953 | 16091.0 |
| xanthine/uracil permease family | ALO42_02368 | Not Available | Positive | 2601958 - 2603235 | 44471.9 |
| ferrochelatase | ALO42_02369 | Not Available | Negative | 2603568 - 2604590 | 38369.5 |
| putative nucleoside-diphosphate sugar epimerase/dehydratase | ALO42_02370 | Not Available | Negative | 2604618 - 2605520 | 32968.2 |
| amine oxidase, flavin-containing | ALO42_02371 | Not Available | Positive | 2605810 - 2606796 | 35727.2 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









