Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m48, ste24p | ALO42_04907 | Not Available | Negative | 2589382 - 2590344 | 34386.1 |
| uncharacterized protein | ALO42_02354 | Not Available | Negative | 2590384 - 2591013 | 23216.9 |
| uncharacterized protein | ALO42_02355 | Not Available | Negative | 2591043 - 2591303 | 9109.03 |
| cysteine-rich cpxcg family protein | ALO42_02356 | Not Available | Negative | 2591303 - 2591488 | 6962.98 |
| acyltransferase family protein | ALO42_02357 | Not Available | Positive | 2591592 - 2592755 | 43770.4 |
| uncharacterized protein | ALO42_02358 | Not Available | Positive | 2593054 - 2593260 | 7808.09 |
| putative lipoprotein | ALO42_02359 | Not Available | Negative | 2593327 - 2593914 | 20591.7 |
| uncharacterized protein | ALO42_04909 | Not Available | Positive | 2594251 - 2594370 | 4558.43 |
| putative malate:quinone oxidoreductase | ALO42_02360 | Not Available | Positive | 2595092 - 2596600 | 54703.6 |
| homocysteine s-methyltransferase | ALO42_04910 | Not Available | Negative | 2596686 - 2597618 | 33062.0 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









