Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO42_02328 | Not Available | Positive | 2557101 - 2557445 | 12308.4 |
| hypothetical protein | ALO42_102168 | Not Available | Positive | 2558271 - 2558579 | 11378.4 |
| uncharacterized protein | ALO42_04896 | Not Available | Negative | 2558620 - 2559042 | 15262.3 |
| glycoside hydrolase family protein | ALO42_100376 | Not Available | Positive | 2559386 - 2560606 | 45520.8 |
| nadh:flavin oxidoreductase, old yellow enzyme family | ALO42_02329 | Not Available | Negative | 2560575 - 2561684 | 40514.3 |
| hypothetical protein | ALO42_101555 | Not Available | Positive | 2561656 - 2561772 | 4157.14 |
| glutathione peroxidase | ALO42_02330 | Not Available | Negative | 2561836 - 2562324 | 17689.1 |
| peptidyl-prolyl cis-trans isomerase | ALO42_04897 | Not Available | Negative | 2562456 - 2562941 | 16921.7 |
| pressure-regulated protein | ALO42_04898 | Not Available | Positive | 2562956 - 2563261 | 11463.4 |
| phosphate acetyltransferase | ALO42_02332 | Not Available | Positive | 2563340 - 2565430 | 75201.1 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









