Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhs family protein | ALO42_04888 | Not Available | Negative | 2514062 - 2517010 | 109422.0 |
| uncharacterized protein | ALO42_02293 | Not Available | Positive | 2517037 - 2517519 | 17895.7 |
| 7-beta hydroxysteroid dehydrogenase-like sical short chain dehydrogenase | ALO42_02294 | Not Available | Positive | 2517535 - 2518353 | 28847.1 |
| fusaric acid resistance protein | ALO42_02295 | Not Available | Negative | 2518428 - 2519288 | 32141.7 |
| uncharacterized protein | ALO42_02296 | Not Available | Negative | 2519314 - 2519517 | 7795.96 |
| rnd-type multidrug efflux system, inner membrane pump protein | ALO42_04890 | Not Available | Negative | 2519504 - 2521693 | 81171.2 |
| rnd-type multidrug efflux system, outer membrane lipoprotein | ALO42_02298 | Not Available | Negative | 2521690 - 2523186 | 53425.3 |
| lysr family transcriptional regulator | ALO42_02299 | Not Available | Positive | 2523370 - 2524317 | 34570.4 |
| d-isomer specific 2-hydroxyacid dehydrogenase | ALO42_02300 | Not Available | Positive | 2524369 - 2525379 | 36598.1 |
| drug/metabolite transporter superfamily protein | ALO42_04891 | Not Available | Negative | 2525439 - 2526497 | 37798.4 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









