Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alginate biosynthesis protein alg44 | ALO42_02282 | Not Available | Positive | 2500423 - 2501595 | 41967.5 |
| sel1 repeat-containing protein | ALO42_04887 | Not Available | Positive | 2501598 - 2503010 | 51113.5 |
| alginate biosynthesis protein alge | ALO42_02284 | Not Available | Positive | 2503007 - 2504491 | 54772.1 |
| alginate biosynthesis protein algg | ALO42_02285 | Not Available | Positive | 2504518 - 2506128 | 59820.7 |
| alginate biosynthesis protein algx | ALO42_02286 | Not Available | Positive | 2506125 - 2507582 | 54127.1 |
| alginate lyase | ALO42_02287 | Not Available | Positive | 2507591 - 2508727 | 42569.5 |
| membrane bound o-acyl transferase, mboat | ALO42_02288 | Not Available | Positive | 2508911 - 2510467 | 58597.5 |
| alginate biosynthesis protein algj | ALO42_02289 | Not Available | Positive | 2510478 - 2511653 | 43094.9 |
| alginate biosynthesis protein algf | ALO42_02290 | Not Available | Positive | 2511666 - 2512334 | 23358.9 |
| mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase | ALO42_02291 | Not Available | Positive | 2512453 - 2513904 | 53530.1 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









