Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose/carbohydrate-selective porin oprb | ALO42_04878 | Not Available | Negative | 2442383 - 2443753 | 50741.3 |
| abc transporter | ALO42_04879 | Not Available | Negative | 2443870 - 2445042 | 42579.9 |
| carbohydrate abc-type transport system, permease protein ii | ALO42_02236 | Not Available | Negative | 2445042 - 2445887 | 30583.1 |
| carbohydrate abc-type transport system, permease protein i | ALO42_02237 | Not Available | Negative | 2445880 - 2446788 | 33768.1 |
| carbohydrate abc-type transport system, periplasmic substrate-binding protein | ALO42_02238 | Not Available | Negative | 2446893 - 2448179 | 45656.3 |
| sensor histidine kinase | ALO42_02239 | Not Available | Negative | 2448349 - 2449767 | 52740.9 |
| two component dna-binding response regulator gltr | ALO42_02240 | Not Available | Negative | 2449817 - 2450554 | 27671.2 |
| glucokinase | ALO42_04880 | Not Available | Negative | 2450605 - 2451570 | 34312.6 |
| 6-phosphogluconate dehydratase | ALO42_100003 | Not Available | Negative | 2451567 - 2453393 | 65406.1 |
| glyceraldehyde-3-phosphate dehydrogenase | ALO42_02242 | Not Available | Positive | 2453613 - 2454614 | 36288.3 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









