Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l4 | ALO42_04162 | Not Available | Negative | 2412991 - 2413593 | 21942.5 |
| 50s ribosomal protein l3 | ALO42_04163 | Not Available | Negative | 2413606 - 2414241 | 22594.1 |
| 30s ribosomal protein s10 | ALO42_04164 | Not Available | Negative | 2414323 - 2414634 | 11767.3 |
| elongation factor tu | ALO42_05409 | Not Available | Negative | 2414776 - 2415969 | 43389.3 |
| elongation factor g | ALO42_04166 | Not Available | Negative | 2416001 - 2418106 | 77259.6 |
| 30s ribosomal protein s7 | ALO42_04167 | Not Available | Negative | 2418137 - 2418607 | 17648.6 |
| 30s ribosomal protein s12 | ALO42_04168 | Not Available | Negative | 2418730 - 2419101 | 13725.7 |
| dna-directed rna polymerase subunit beta' | ALO42_05410 | Not Available | Negative | 2419301 - 2423530 | 155691.0 |
| dna-directed rna polymerase subunit beta | ALO42_05414 | Not Available | Negative | 2423565 - 2427641 | 151168.0 |
| 50s ribosomal protein l7/l12 | ALO42_04171 | Not Available | Negative | 2427860 - 2428225 | 12466.0 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









