Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensory box/diguanylate cye domain protein | ALO42_03958 | Not Available | Positive | 154623 - 155621 | 37324.1 |
| putative signal transduction protein | ALO42_03959 | Not Available | Negative | 156368 - 157756 | 49694.4 |
| 4-aminobutyrate aminotransferase | ALO42_03960 | Not Available | Negative | 157913 - 159193 | 44919.7 |
| hypothetical protein | ALO42_101035 | Not Available | Positive | 159155 - 159328 | 6254.65 |
| succinate-semialdehyde dehydrogenase | ALO42_03961 | Not Available | Negative | 159373 - 160815 | 51460.8 |
| lysine exporter protein lyse/ygga | ALO42_03962 | Not Available | Negative | 161102 - 161737 | 22151.6 |
| flavoprotein monooxygenase | ALO42_05331 | Not Available | Negative | 161783 - 163168 | 49939.2 |
| Trna-arg | Not Available | Not Available | Positive | 163192 - 163268 | Not Available |
| uncharacterized protein | ALO42_05472 | Not Available | Negative | 165626 - 168670 | 112465.0 |
| uncharacterized protein | ALO42_03964 | Not Available | Positive | 170223 - 170657 | 15752.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









