Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO42_102277 | Not Available | Negative | 2394472 - 2394915 | 16280.6 |
| single-stranded dna-binding protein | ALO42_04138 | Not Available | Negative | 2395165 - 2395731 | 20918.2 |
| major facilitator superfamily transporter | ALO42_04139 | Not Available | Negative | 2395741 - 2397135 | 48920.2 |
| uvrabc system protein a | ALO42_04140 | Not Available | Positive | 2397265 - 2400099 | 104409.0 |
| bacterioferritin | ALO42_04141 | Not Available | Negative | 2400194 - 2400658 | 18082.6 |
| 50s ribosomal protein l17 | ALO42_04142 | Not Available | Negative | 2400922 - 2401308 | 14510.7 |
| dna-directed rna polymerase subunit alpha | ALO42_04143 | Not Available | Negative | 2401350 - 2402351 | 36675.9 |
| 30s ribosomal protein s4 | ALO42_04144 | Not Available | Negative | 2402374 - 2402994 | 23077.8 |
| 30s ribosomal protein s11 | ALO42_04145 | Not Available | Negative | 2403013 - 2403402 | 13616.4 |
| 30s ribosomal protein s13 | ALO42_04146 | Not Available | Negative | 2403433 - 2403789 | 13370.5 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









