Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arylesterase | ALO42_05401 | Not Available | Positive | 2358792 - 2359886 | 39701.0 |
| 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase | ALO42_05403 | Not Available | Negative | 2359934 - 2360911 | 35334.4 |
| uncharacterized protein | ALO42_04115 | Not Available | Positive | 2361253 - 2361915 | 22695.5 |
| ferric siderophore uptake system, mota/tolq/exbb family protein | ALO42_04116 | Not Available | Positive | 2361926 - 2362618 | 25123.5 |
| tonb system transport protein exbd | ALO42_04117 | Not Available | Positive | 2362620 - 2363024 | 14045.7 |
| tonb-dependent receptor | ALO42_04118 | Not Available | Positive | 2363048 - 2365402 | 85675.1 |
| uncharacterized protein | ALO42_04119 | Not Available | Positive | 2365633 - 2365872 | 8979.87 |
| fmn-dependent nadh-azoreductase | ALO42_05404 | Not Available | Positive | 2366078 - 2366620 | 19723.5 |
| fic family protein | ALO42_05475 | Not Available | Negative | 2366613 - 2368124 | 57201.7 |
| pas domain/sensory box/diguanylate cye domain protein | ALO42_05405 | Not Available | Negative | 2368396 - 2371329 | 108101.0 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









