Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO42_04105 | Not Available | Negative | 2349136 - 2349498 | 12829.3 |
| polyketide cye snoal-like domain protein | ALO42_100161 | Not Available | Negative | 2349551 - 2350081 | 19814.8 |
| uncharacterized protein | ALO42_04106 | Not Available | Positive | 2350275 - 2350862 | 21104.8 |
| antimicrobial peptide abc-type transport system, atp-binding protein | ALO42_04107 | Not Available | Positive | 2350932 - 2351642 | 25891.2 |
| permease | ALO42_04108 | Not Available | Positive | 2351644 - 2352909 | 46302.6 |
| lipoprotein | ALO42_04109 | Not Available | Positive | 2352918 - 2353442 | 19139.3 |
| outer membrane protein ompw | ALO42_04110 | Not Available | Positive | 2353546 - 2354232 | 24438.3 |
| nad-dependent epimerase/dehydratase | ALO42_04111 | Not Available | Negative | 2354497 - 2355426 | 33395.8 |
| dtdp-4-dehydrorhamnose reductase | ALO42_04112 | Not Available | Negative | 2355419 - 2356303 | 32676.0 |
| mechanosensitive ion channel family protein | ALO42_05400 | Not Available | Negative | 2356457 - 2358898 | 87491.0 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









