Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional activator osme | ALO42_04088 | Not Available | Positive | 2332862 - 2333200 | 12646.1 |
| hypothetical protein | ALO42_101410 | Not Available | Positive | 2333368 - 2333703 | 12630.8 |
| bacterioferritin | ALO42_04089 | Not Available | Positive | 2333704 - 2334246 | 20305.7 |
| asma | ALO42_05394 | Not Available | Negative | 2334368 - 2336434 | 73991.2 |
| unsaturated fatty acid biosynthesis transcriptional regulator dest | ALO42_04091 | Not Available | Positive | 2336658 - 2337290 | 23334.5 |
| urease accessory protein uree | ALO42_04092 | Not Available | Positive | 2337509 - 2338027 | 19471.2 |
| urease accessory protein uref | ALO42_100068 | Not Available | Positive | 2338024 - 2338698 | 24795.7 |
| urease accessory protein ureg | ALO42_04093 | Not Available | Positive | 2338720 - 2339337 | 22040.5 |
| hydrogenase/urease accessory protein hupe/urej | ALO42_04094 | Not Available | Positive | 2339364 - 2339936 | 18944.6 |
| uncharacterized protein | ALO42_04095 | Not Available | Negative | 2339985 - 2340404 | 15140.2 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









