Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme biosynthesis protein hemy | ALO42_03767 | Not Available | Positive | 2323351 - 2324595 | 46554.2 |
| disulfide bond formation protein b | ALO42_03768 | Not Available | Positive | 2324812 - 2325339 | 19034.6 |
| regulator of rna polymerase sigma subunit, rsd/algq | ALO42_03769 | Not Available | Positive | 2325487 - 2325987 | 18763.0 |
| curved-dna-binding protein | ALO42_05391 | Not Available | Negative | 2327658 - 2327967 | 12087.3 |
| yegd-like heat shock protein/molecular chaperone | ALO42_04084 | Not Available | Positive | 2328256 - 2329521 | 46517.3 |
| putative permease | ALO42_05392 | Not Available | Negative | 2329799 - 2330809 | 36574.6 |
| putative phosphate starvation-inducible protein psif | ALO42_04086 | Not Available | Negative | 2330998 - 2331324 | 11340.8 |
| eama-like drug/metabolite transporter family protein | ALO42_04087 | Not Available | Positive | 2331441 - 2332322 | 31181.5 |
| uncharacterized protein | ALO42_05393 | Not Available | Negative | 2332319 - 2332552 | 8383.94 |
| hypothetical protein | ALO42_102391 | Not Available | Negative | 2332653 - 2332856 | 7924.73 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









