Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO42_04823 | Not Available | Negative | 2291244 - 2293904 | 98709.2 |
| uncharacterized protein | ALO42_04827 | Not Available | Negative | 2294002 - 2297232 | 121046.0 |
| k antiporter nhap2 | ALO42_02006 | Not Available | Positive | 2297384 - 2299126 | 61504.1 |
| putative potassium efflux system component, mechanosensitive ion channel family | ALO42_02007 | Not Available | Positive | 2299165 - 2302554 | 125749.0 |
| carbamoyl-phosphate synthase subunit l | ALO42_02008 | Not Available | Negative | 2302641 - 2304374 | 61581.3 |
| urea amidolyase-related protein | ALO42_02009 | Not Available | Negative | 2304371 - 2305975 | 56372.1 |
| hypothetical protein | ALO42_02010 | Not Available | Negative | 2306151 - 2306681 | 19547.1 |
| hypothetical protein | ALO42_02011 | Not Available | Negative | 2306684 - 2307448 | 26641.6 |
| putative mn2+/fe2+ transporter, nramp family | ALO42_02012 | Not Available | Negative | 2307465 - 2308697 | 42965.8 |
| gntr family transcriptional regulator | ALO42_04829 | Not Available | Positive | 2308912 - 2309616 | 26096.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









