Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54 dependent transcriptional regulator | ALO42_05325 | Not Available | Negative | 143131 - 143556 | 15729.6 |
| zn-dependent hydrolase, betal-lactamse fold protein | ALO42_03950 | Not Available | Positive | 143730 - 144620 | 32854.4 |
| sulfate/thiosulfate import atp-binding protein cysa | ALO42_03951 | Not Available | Negative | 146907 - 147887 | 36826.1 |
| sulfate abc-type transport system, permease protein cysw | ALO42_03952 | Not Available | Negative | 147890 - 148762 | 31491.1 |
| binding-protein dependent transport system inner membrane protein | ALO42_05326 | Not Available | Negative | 148776 - 149621 | 30508.6 |
| sulfate abc-type transport system, periplasmic substrate-binding protein | ALO42_05327 | Not Available | Negative | 149692 - 150762 | 39367.4 |
| hypothetical protein | ALO42_101927 | Not Available | Positive | 150706 - 150834 | 4709.96 |
| uncharacterized protein | ALO42_03955 | Not Available | Negative | 150855 - 151034 | 6649.94 |
| pas:ggdef protein | ALO42_05328 | Not Available | Negative | 151236 - 153185 | 71534.6 |
| fatty acid desaturase | ALO42_03957 | Not Available | Positive | 153225 - 154493 | 48253.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









