Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| solute-binding family 3 protein | ALO42_100565 | Not Available | Negative | 2276678 - 2277451 | 28986.9 |
| gnat family acetyltransferase | ALO42_01995 | Not Available | Positive | 2277647 - 2278105 | 17442.8 |
| uncharacterized protein | ALO42_01996 | Not Available | Negative | 2278113 - 2278442 | 12211.7 |
| putative metal-dependent hydrolase | ALO42_01997 | Not Available | Negative | 2278436 - 2278960 | 20074.3 |
| response regulator/sensory box/ diguanylate cye domain/eal domain protein | ALO42_01998 | Not Available | Negative | 2278993 - 2281131 | 79451.5 |
| alginate lyase | ALO42_01999 | Not Available | Positive | 2281450 - 2282121 | 25166.2 |
| sodium/proline symporter putp | ALO42_04822 | Not Available | Negative | 2282205 - 2283818 | 57182.7 |
| trifunctional protein: transcriptional repressor of puta and putp / proline dehydrogenase / pyrroline-5-carboxylate dehydrogenase | ALO42_02001 | Not Available | Positive | 2284150 - 2288103 | 142758.0 |
| actin-like protein | ALO42_02002 | Not Available | Negative | 2288316 - 2289176 | 31165.4 |
| acyl-coa dehydrogenase | ALO42_02003 | Not Available | Positive | 2289419 - 2291221 | 66623.1 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









