Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide heptosyltransferase i | ALO42_01987 | Not Available | Negative | 2261202 - 2262266 | 39464.5 |
| adp-heptose--lipooligosaccharide heptosyltransferase ii | ALO42_01988 | Not Available | Negative | 2262269 - 2263303 | 37992.0 |
| hypothetical protein | ALO42_101168 | Not Available | Positive | 2263220 - 2263390 | 6487.72 |
| glutamate-ammonia-ligase adenylyltransferase | ALO42_01989 | Not Available | Negative | 2263433 - 2266390 | 110550.0 |
| pyruvate dehydrogenase e1 component | ALO42_01990 | Not Available | Positive | 2266775 - 2269420 | 99294.9 |
| dihydrolipoamide acetyltransferase, e2 component of pyruvate dehydrogenase complex | ALO42_01991 | Not Available | Positive | 2269563 - 2271209 | 56538.3 |
| atp-dependent rna helicase dbpa | ALO42_04821 | Not Available | Positive | 2271372 - 2272904 | 55886.2 |
| hypothetical protein | ALO42_102824 | Not Available | Negative | 2273063 - 2273287 | 8099.26 |
| flavoprotein, family | ALO42_01993 | Not Available | Positive | 2273186 - 2274364 | 42776.3 |
| integral membrane protein, yccs/yhfk family | ALO42_01994 | Not Available | Positive | 2274502 - 2276700 | 81146.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









