Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| smr family multidrug efflux transporter | ALO42_01970 | Not Available | Positive | 2234032 - 2234364 | 11699.1 |
| oxidoreductase, fad-binding protein | ALO42_01971 | Not Available | Positive | 2234407 - 2235588 | 42096.9 |
| oxidoreductase, aldo/keto reductase family protein | ALO42_100105 | Not Available | Positive | 2235585 - 2236400 | 29192.1 |
| uncharacterized protein | ALO42_01972 | Not Available | Positive | 2236437 - 2237393 | 36275.1 |
| bifunctional protein hlde | ALO42_01973 | Not Available | Negative | 2237522 - 2238946 | 50316.8 |
| lipid a export atp-binding/permease protein msba | ALO42_101309 | Not Available | Negative | 2239075 - 2240994 | 70059.8 |
| putative toluene tolerance protein | ALO42_01974 | Not Available | Positive | 2240993 - 2241631 | 24135.1 |
| uncharacterized protein | ALO42_04818 | Not Available | Negative | 2241680 - 2242849 | 43578.3 |
| wbcx-like glycosyl transferase, family a | ALO42_01976 | Not Available | Negative | 2242839 - 2243609 | 29759.4 |
| putative glycosyltransferase group 1 protein | ALO42_01977 | Not Available | Negative | 2243644 - 2244600 | 36658.3 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









