Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3',5'-cyclic adenosine monophosphate phosphodiesterase cpda | ALO42_01963 | Not Available | Negative | 2223357 - 2224163 | 29405.8 |
| hypothetical protein | ALO42_100493 | Not Available | Negative | 2224251 - 2224697 | 16115.6 |
| uncharacterized protein | ALO42_01964 | Not Available | Negative | 2224613 - 2225020 | 15679.6 |
| uncharacterized protein | ALO42_01965 | Not Available | Negative | 2225217 - 2225669 | 17187.8 |
| putative adp-ribose pyrophosphatase | ALO42_01966 | Not Available | Negative | 2225660 - 2226307 | 24145.8 |
| putative lipoprotein | ALO42_100281 | Not Available | Positive | 2226401 - 2227231 | 30658.3 |
| permease for cytosine/purine, uracil, thiamine, allantoin | ALO42_04816 | Not Available | Negative | 2227200 - 2228642 | 50356.1 |
| phosphomethylpyrimidine synthase | ALO42_100007 | Not Available | Negative | 2228804 - 2230714 | 70452.0 |
| type i secretion outer membrane protein, tolc | ALO42_01968 | Not Available | Positive | 2231120 - 2232559 | 52845.3 |
| 3-deoxy-d-manno-octulosonic-acid transferase | ALO42_01969 | Not Available | Negative | 2232682 - 2233962 | 46847.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









