Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO42_102869 | Not Available | Positive | 2191507 - 2191608 | 3560.4 |
| sensory box domain protein | ALO42_04810 | Not Available | Negative | 2191695 - 2193074 | 50079.5 |
| sensory box/diguanylate cyclase domain protein | ALO42_04811 | Not Available | Negative | 2193270 - 2195516 | 83622.1 |
| putative dihydroneopterin triphosphate pyrophosphohydrolase | ALO42_100865 | Not Available | Negative | 2195993 - 2196481 | 18497.0 |
| gntr family transcriptional regulator | ALO42_100145 | Not Available | Negative | 2196488 - 2197174 | 27075.4 |
| uncharacterized protein | ALO42_01941 | Not Available | Negative | 2197171 - 2197566 | 14744.3 |
| isochorismatase hydrolase | ALO42_01942 | Not Available | Negative | 2197566 - 2198243 | 24440.5 |
| abc transporter | ALO42_01943 | Not Available | Negative | 2198240 - 2199775 | 55751.1 |
| isochorismatase family protein | ALO42_01944 | Not Available | Negative | 2199778 - 2200464 | 24515.7 |
| formamidase | ALO42_01945 | Not Available | Negative | 2200469 - 2201485 | 37026.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









