Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO42_01921 | Not Available | Positive | 2173698 - 2173922 | 8076.47 |
| flib-like methylase domain protein | ALO42_01922 | Not Available | Negative | 2173941 - 2174696 | 27621.6 |
| gnat family acetyltransferase | ALO42_01923 | Not Available | Negative | 2174814 - 2175386 | 21339.7 |
| chemotaxis protein chev | ALO42_01924 | Not Available | Negative | 2175341 - 2176237 | 31999.9 |
| disulfide bond formation protein b | ALO42_01925 | Not Available | Positive | 2176846 - 2177355 | 18174.8 |
| hypothetical protein | ALO42_102247 | Not Available | Negative | 2177532 - 2177789 | 9699.59 |
| cytochrome o ubiquinol oxidase subunit ii | ALO42_100387 | Not Available | Positive | 2177722 - 2178759 | 37987.2 |
| cytochrome o ubiquinol oxidase, subunit i | ALO42_01926 | Not Available | Positive | 2178763 - 2180775 | 74546.3 |
| cytochrome o ubiquinol oxidase, subunit iii | ALO42_01927 | Not Available | Positive | 2180779 - 2181411 | 23156.2 |
| protoheme ix farnesyltransferase | ALO42_01928 | Not Available | Positive | 2181754 - 2182641 | 32359.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









