Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hit family hydrolase | ALO42_00753 | Not Available | Positive | 135335 - 135673 | 12729.5 |
| 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | ALO42_00754 | Not Available | Positive | 135795 - 136442 | 23706.5 |
| s-adenosylmethionine decarboxylase proenzyme | ALO42_00755 | Not Available | Negative | 136512 - 137306 | 30174.7 |
| osmc/ohr family protein | ALO42_00756 | Not Available | Negative | 137549 - 137977 | 15434.8 |
| camp-regulatory protein | ALO42_00757 | Not Available | Positive | 138174 - 138818 | 24077.3 |
| uncharacterized protein | ALO42_04464 | Not Available | Negative | 138830 - 139555 | 26441.6 |
| indole-3-glycerol phosphate synthase | ALO42_00759 | Not Available | Negative | 139560 - 140396 | 30321.6 |
| anthranilate phosphoribosyltransferase | ALO42_00760 | Not Available | Negative | 140393 - 141454 | 37483.2 |
| anthranilate synthase, component ii | ALO42_00761 | Not Available | Negative | 141463 - 142062 | 21685.9 |
| uncharacterized protein | ALO42_00762 | Not Available | Negative | 142474 - 142986 | 18556.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









