Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail tube protein | ALO42_03298 | Not Available | Negative | 1958737 - 1959084 | 12454.8 |
| Tail sheath protein | ALO42_05139 | Not Available | Negative | 1959145 - 1960641 | 53253.1 |
| Hypothetical protein | ALO42_03300 | Not Available | Negative | 1960845 - 1961435 | 21068.6 |
| Lipoprotein | ALO42_03301 | Not Available | Negative | 1961482 - 1961820 | 12503.9 |
| Holin | ALO42_03302 | Not Available | Negative | 1961801 - 1962190 | 14112.7 |
| bacteriocin | ALO42_03303 | Not Available | Negative | 1962850 - 1963566 | 25538.3 |
| uncharacterized protein | ALO42_03304 | Not Available | Negative | 1964148 - 1964591 | 16015.3 |
| Repressor protein | ALO42_03305 | Not Available | Positive | 1964733 - 1965392 | 24646.9 |
| Tail fiber protein | ALO42_04984 | Not Available | Negative | 2817195 - 2818505 | 47827.1 |
| Hypothetical protein | ALO42_100561 | Not Available | Negative | 2818553 - 2818951 | 14809.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









