Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pseudouridine synthase | ALO42_04678 | Not Available | Positive | 2159945 - 2160767 | 31133.4 |
| two-component dna-binding heavy metal response regulator | ALO42_01915 | Not Available | Negative | 2161798 - 2162475 | 25201.6 |
| acriflavin resistance protein | ALO42_04809 | Not Available | Negative | 2162486 - 2165590 | 110817.0 |
| rnd-type cation/multidrug efflux system, membrane fusion protein mexm | ALO42_01916 | Not Available | Negative | 2165587 - 2166753 | 41479.0 |
| uncharacterized protein | ALO42_01917 | Not Available | Positive | 2167046 - 2167426 | 13544.5 |
| fimbrial biosynthesis protein fima | ALO42_01918 | Not Available | Positive | 2167757 - 2168341 | 19630.3 |
| pili assembly chaperone: pili assembly chaperone | ALO42_100395 | Not Available | Positive | 2168372 - 2169157 | 28971.8 |
| outer membrane usher protein fimd | ALO42_100972 | Not Available | Positive | 2169288 - 2171822 | 91456.0 |
| pili assembly chaperone | ALO42_01919 | Not Available | Positive | 2171813 - 2172604 | 28405.1 |
| putative fimbral protein | ALO42_01920 | Not Available | Positive | 2172606 - 2173604 | 36163.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









