Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobyric acid synthase | ALO42_03199 | Not Available | Negative | 2137544 - 2139004 | 52268.8 |
| cobalamin biosynthesis protein cobc | ALO42_03200 | Not Available | Negative | 2139001 - 2140005 | 37211.7 |
| cobalamin biosynthesis protein cobd | ALO42_03201 | Not Available | Negative | 2139998 - 2140906 | 32860.6 |
| cobyrinic acid a,c-diamide reductase | ALO42_03202 | Not Available | Negative | 2140903 - 2141553 | 24201.5 |
| cobyrinic acid a,c-diamide synthase | ALO42_03203 | Not Available | Negative | 2141550 - 2142845 | 46116.8 |
| cobalamin adenolsyltransferase/cobinamide atp-dependent adenolsyltransferase | ALO42_03204 | Not Available | Negative | 2142871 - 2143554 | 25060.3 |
| l-sorbosone dehydrogenase | ALO42_03205 | Not Available | Positive | 2143907 - 2145235 | 47193.9 |
| nlpc/p60 family lipoprotein | ALO42_03206 | Not Available | Negative | 2145575 - 2146120 | 19194.3 |
| nlp/p60-like protein | ALO42_03207 | Not Available | Negative | 2146210 - 2146938 | 26287.3 |
| nad-dependent deacetylase | ALO42_03208 | Not Available | Negative | 2147014 - 2147760 | 26963.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









