Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO42_100971 | Not Available | Positive | 2105847 - 2106044 | 7389.8 |
| dna gyrase subunit a | ALO42_05111 | Not Available | Negative | 2106144 - 2109002 | 105355.0 |
| methylthioribose-1-phosphate isomerase | ALO42_03173 | Not Available | Negative | 2109226 - 2110323 | 39962.2 |
| putative n-ethylammeline chlorohydrolase | ALO42_03174 | Not Available | Positive | 2110423 - 2111754 | 47984.6 |
| ubiquinone biosynthesis o-methyltransferase | ALO42_03175 | Not Available | Positive | 2111840 - 2112538 | 25900.2 |
| phosphoglycolate phosphatase-like protein | ALO42_03176 | Not Available | Positive | 2112539 - 2113213 | 24818.9 |
| putative oxoacyl- reductase | ALO42_03177 | Not Available | Positive | 2113226 - 2113966 | 26205.4 |
| diguanylate cye domain protein | ALO42_03178 | Not Available | Positive | 2114174 - 2115100 | 34792.9 |
| uncharacterized protein | ALO42_05113 | Not Available | Negative | 2115128 - 2115910 | 29860.7 |
| sensory box/ggdef/eal domain protein | ALO42_03180 | Not Available | Negative | 2115942 - 2118413 | 91330.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









